preview ####### Takes a JSON object of filters in the request body and returns a "preview" of the cohort that would result from passing a similar request to the cohort **save** endpoint. This preview consists of two lists: the lists of participant (aka patient) barcodes, and the list of sample barcodes. Authentication is not required. Example: $ curl https:/api-dot-isb-cgc.appspot.com/\_ah/api/cohort\_api/v1/preview\_cohort -d '{"Study": "BRCA,OV"}' -H "Content-Type: application/json" **Access control:** To call this method, you must have the following roles: - None Request HTTP request POST https://api-dot-isb-cgc.appspot.com/\_ah/api/cohort\_api/v1/preview\_cohort Parameters None Request body In the request body, supply a metadata resource: .. code-block:: javascript { 'adenocarcinoma_invasion ': string, 'age_at_initial_pathologic_diagnosis ': string, 'anatomic_neoplasm_subdivision ': string, 'avg_percent_lymphocyte_infiltration ': float, 'avg_percent_monocyte_infiltration ': float, 'avg_percent_necrosis ': float, 'avg_percent_neutrophil_infiltration ': float, 'avg_percent_normal_cells ': float, 'avg_percent_stromal_cells ': float, 'avg_percent_tumor_cells ': float, 'avg_percent_tumor_nuclei ': float, 'batch_number ': integer, 'bcr ': string, 'clinical_M ': string, 'clinical_N ': string, 'clinical_stage ': string, 'clinical_T ': string, 'colorectal_cancer ': string, 'country ': string, 'country_of_procurement ': string, 'days_to_birth ': integer, 'days_to_collection ': integer, 'days_to_death ': integer, 'days_to_initial_pathologic_diagnosis ': integer, 'days_to_last_followup ': integer, 'days_to_submitted_specimen_dx ': integer, 'Study ': string, 'ethnicity ': string, 'frozen_specimen_anatomic_site ': string, 'gender ': string, 'height ': integer, 'histological_type ': string, 'history_of_colon_polyps ': string, 'history_of_neoadjuvant_treatment ': string, 'history_of_prior_malignancy ': string, 'hpv_calls ': string, 'hpv_status ': string, 'icd_10 ': string, 'icd_o_3_histology ': string, 'icd_o_3_site ': string, 'lymph_node_examined_count ': integer, 'lymphatic_invasion ': string, 'lymphnodes_examined ': string, 'lymphovascular_invasion_present ': string, 'max_percent_lymphocyte_infiltration ': integer, 'max_percent_monocyte_infiltration ': integer, 'max_percent_necrosis ': integer, 'max_percent_neutrophil_infiltration ': integer, 'max_percent_normal_cells ': integer, 'max_percent_stromal_cells ': integer, 'max_percent_tumor_cells ': integer, 'max_percent_tumor_nuclei ': integer, 'menopause_status ': string, 'min_percent_lymphocyte_infiltration ': integer, 'min_percent_monocyte_infiltration ': integer, 'min_percent_necrosis ': integer, 'min_percent_neutrophil_infiltration ': integer, 'min_percent_normal_cells ': integer, 'min_percent_stromal_cells ': integer, 'min_percent_tumor_cells ': integer, 'min_percent_tumor_nuclei ': integer, 'mononucleotide_and_dinucleotide_marker_panel_analysis_status': string, 'mononucleotide_marker_panel_analysis_status ': string, 'neoplasm_histologic_grade ': string, 'new_tumor_event_after_initial_treatment ': string, 'number_of_lymphnodes_examined ': integer, 'number_of_lymphnodes_positive_by_he ': integer, 'ParticipantBarcode ': string, 'pathologic_M ': string, 'pathologic_N ': string, 'pathologic_stage ': string, 'pathologic_T ': string, 'person_neoplasm_cancer_status ': string, 'pregnancies ': string, 'preservation_method ': string, 'primary_neoplasm_melanoma_dx ': string, 'primary_therapy_outcome_success ': string, 'prior_dx ': string, 'Project ': string, 'psa_value ': float, 'race ': string, 'residual_tumor ': string, 'SampleBarcode ': string, 'tobacco_smoking_history ': string, 'total_number_of_pregnancies ': integer, 'tumor_tissue_site ': string, 'tumor_pathology ': string, 'tumor_type ': string, 'weiss_venous_invasion ': string, 'vital_status ': string, 'weight ': integer, 'year_of_initial_pathologic_diagnosis ': string, 'SampleTypeCode ': string, 'has_Illumina_DNASeq ': string, 'has_BCGSC_HiSeq_RNASeq ': string, 'has_UNC_HiSeq_RNASeq ': string, 'has_BCGSC_GA_RNASeq ': string, 'has_UNC_GA_RNASeq ': string, 'has_HiSeq_miRnaSeq ': string, 'has_GA_miRNASeq ': string, 'has_RPPA ': string, 'has_SNP6 ': string, 'has_27k ': string, 'has_450k ': string } +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | **Parameter name** | **Value** | **Description** | +======================================================================+=============+==============================================================================================================================================================+ | adenocarcinoma\_invasion | string | | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | age\_at\_initial\_pathologic\_diagnosis | string | Age at which a condition or disease was first diagnosed. (in years) | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | anatomic\_neoplasm\_subdivision | string | Text term to describe the spatial location, subdivisions and/or anatomic site name of a tumor. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | avg\_percent\_lymphocyte\_infiltration | float | Average in the series of numeric values to represent the percentage of lymphocyte infiltration in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | avg\_percent\_monocyte\_infiltration | float | Average in the series of numeric values to represent the percentage of monocyte infiltration in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | avg\_percent\_necrosis | float | Average in the series of numeric values to represent the percentage of cell death in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | avg\_percent\_neutrophil\_infiltration | float | Average in the series of numeric values to represent the percentage of neutrophil infiltration in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | avg\_percent\_normal\_cells | float | Average in the series of numeric values to represent the percentage of normal cells in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | avg\_percent\_stromal\_cells | float | Average in the series of numeric values to represent the percentage of stromal cells in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | avg\_percent\_tumor\_cells | float | Average in the series of numeric values to represent the percentage of tumor cells in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | avg\_percent\_tumor\_nuclei | float | Average in the series of numeric values to represent the percentage of tumor nuclei in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | batch\_number | integer | groups samples by the batch they were processed in | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | bcr | string | A TCGA center where samples are carefully catalogued, processed, quality-checked and stored along with participant clinical information. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | clinical\_M | string | Extent of the distant metastasis for the cancer based on evidence obtained from clinical assessment parameters determined prior to treatment. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | clinical\_N | string | Extent of the regional lymph node involvement for the cancer based on evidence obtained from clinical assessment parameters determined prior to treatment. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | clinical\_stage | string | Stage group determined from clinical information on the tumor (T), regional node (N) and metastases (M) and by grouping cases with similar prognosis ... | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | clinical\_T | string | Extent of the primary cancer based on evidence obtained from clinical assessment parameters determined prior to treatment. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | colorectal\_cancer | string | Text term to signify whether a patient has been diagnosed with colorectal cancer. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | country | string | Text to identify the name of the state, province, or country in which the sample was procured. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | country\_of\_procurement | string | Text to identify the name of the state, province, or country in which the sample was procured. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | days\_to\_birth | integer | Time interval from a person's date of birth to the date of initial pathologic diagnosis, represented as a calculated number of days. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | days\_to\_collection | integer | | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | days\_to\_death | integer | Time interval from a person's date of death to the date of initial pathologic diagnosis, represented as a calculated number of days. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | days\_to\_initial\_pathologic\_diagnosis | integer | Numeric value to represent the day of an individual's initial pathologic diagnosis of cancer. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | days\_to\_last\_followup | integer | Time interval from the date of last followup to the date of initial pathologic diagnosis, represented as a calculated number of days. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | days\_to\_submitted\_specimen\_dx | integer | Time interval from the date of diagnosis of the submitted sample to the date of initial pathologic diagnosis, represented as a calculated number of d... | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | Study | string | A disease study is the sum of results from all experiments for a specific cancer type (or tumor type) that TCGA is tasked to study. Within the projec... | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | ethnicity | string | The text for reporting information about ethnicity based on the Office of Management and Budget (OMB) categories. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | frozen\_specimen\_anatomic\_site | string | Text description of the origin and the anatomic site regarding the frozen biospecimen tumor tissue sample. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | gender | string | Text designations that identify gender. Gender is described as the assemblage of properties that distinguish people on the basis of their societal ro... | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | height | integer | The height of the patient in centimeters. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | histological\_type | string | Text term for the structural pattern of cancer cells used to define a microscopic diagnosis. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | history\_of\_colon\_polyps | string | Yes/No indicator to describe if the subject had a previous history of colon polyps as noted in the history/physical or previous endoscopic report(s). | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | history\_of\_neoadjuvant\_treatment | string | Text term to describe the patient's history of neoadjuvant treatment and the kind of treament given prior to resection of the tumor. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | history\_of\_prior\_malignancy | string | Text term to describe the patient's history of prior cancer diagnosis and the spatial location of any previous cancer occurrence. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | hpv\_calls | string | Results of HPV tests | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | hpv\_status | string | Current HPV status | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | icd\_10 | string | The tenth version of the International Classification of Disease (ICD), published by the World Health Organization in 1992.\_A system of numbered cate... | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | icd\_o\_3\_histology | string | The third edition of the International Classification of Diseases for Oncology, published in 2000, used principally in tumor and cancer registries fo... | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | icd\_o\_3\_site | string | The third edition of the International Classification of Diseases for Oncology, published in 2000, used principally in tumor and cancer registries fo... | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | lymph\_node\_examined\_count | integer | | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | lymphatic\_invasion | string | a yes/no indicator to ask if malignant cells are present in small or thin-walled vessels suggesting lymphatic involvement. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | lymphnodes\_examined | string | the yes/no/unknown indicator whether a lymph node assessment was performed at the primary presentation of disease. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | lymphovascular\_invasion\_present | string | the yes/no indicator to ask if large vessel (vascular) invasion or small, thin-walled (lymphatic) invasion was detected in a tumor specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | max\_percent\_lymphocyte\_infiltration | integer | Maximum in the series of numeric values to represent the percentage of lymphcyte infiltration in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | max\_percent\_monocyte\_infiltration | integer | Maximum in the series of numeric values to represent the percentage of monocyte infiltration in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | max\_percent\_necrosis | integer | Maximum in the series of numeric values to represent the percentage of cell death in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | max\_percent\_neutrophil\_infiltration | integer | Maximum in the series of numeric values to represent the percentage of neutrophil infiltration in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | max\_percent\_normal\_cells | integer | Maximum in the series of numeric values to represent the percentage of normal cells in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | max\_percent\_stromal\_cells | integer | Maximum in the series of numeric values to represent the percentage of stromal cells in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | max\_percent\_tumor\_cells | integer | Maximum in the series of numeric values to represent the percentage of tumor cells in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | max\_percent\_tumor\_nuclei | integer | Maximum in the series of numeric values to represent the percentage of tumor nuclei in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | menopause\_status | string | Text term to signify the status of a woman's menopause, the permanent cessation of menses, usually defined by 6 to 12 months of amenorrhea. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | min\_percent\_lymphocyte\_infiltration | integer | Minimum in the series of numeric values to represent the percentage of lymphcyte infiltration in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | min\_percent\_monocyte\_infiltration | integer | Minimum in the series of numeric values to represent the percentage of monocyte infiltration in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | min\_percent\_necrosis | integer | Minimum in the series of numeric values to represent the percentage of cell death in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | min\_percent\_neutrophil\_infiltration | integer | Minimum in the series of numeric values to represent the percentage of neutrophil infiltration in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | min\_percent\_normal\_cells | integer | Minimum in the series of numeric values to represent the percentage of normal cells in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | min\_percent\_stromal\_cells | integer | Minimum in the series of numeric values to represent the percentage of stromal cells in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | min\_percent\_tumor\_cells | integer | Minimum in the series of numeric values to represent the percentage of tumor cells in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | min\_percent\_tumor\_nuclei | integer | Minimum in the series of numeric values to represent the percentage of tumor nuclei in a malignant tumor sample or specimen. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | mononucleotide\_and\_dinucleotide\_marker\_panel\_analysis\_status | string | Text result of microsatellite instability (MSI) testing at using a mononucleotide and dinucleotide microsatellite panel. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | mononucleotide\_marker\_panel\_analysis\_status | string | Text result of microsatellite instability (MSI) testing using a mononucleotide microsatellite panel. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | neoplasm\_histologic\_grade | string | Numeric value to express the degree of abnormality of cancer cells, a measure of differentiation and aggressiveness. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | new\_tumor\_event\_after\_initial\_treatment | string | Yes/No/Unknown indicator to identify whether a patient has had a new tumor event after initial treatment. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | number\_of\_lymphnodes\_examined | integer | the total number of lymph nodes removed and pathologically assessed for disease. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | number\_of\_lymphnodes\_positive\_by\_he | integer | Numeric value to signify the count of positive lymph nodes identified through hematoxylin and eosin (H&E) staining light microscopy. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | ParticipantBarcode | string | The barcode assigned by TCGA to the Participant | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | pathologic\_M | string | Code to represent the defined absence or presence of distant spread or metastases (M) to locations via vascular channels or lymphatics beyond the reg... | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | pathologic\_N | string | The codes that represent the stage of cancer based on the nodes present (N stage) according to criteria based on multiple editions of the AJCC's Cance... | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | pathologic\_stage | string | The extent of a cancer, especially whether the disease has spread from the original site to other parts of the body based on AJCC staging criteria. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | pathologic\_T | string | Code of pathological T (primary tumor) to define the size or contiguous extension of the primary tumor (T), using staging criteria from the American ... | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | person\_neoplasm\_cancer\_status | string | The state or condition of an individual's neoplasm at a particular point in time. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | pregnancies | string | Value to describe the number of full-term pregnancies that a woman has experienced. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | preservation\_method | string | | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | primary\_neoplasm\_melanoma\_dx | string | Text indicator to signify whether a person had a primary diagnosis of melanoma. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | primary\_therapy\_outcome\_success | string | Measure of Success | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | prior\_dx | string | Text term to describe the patient's history of prior cancer diagnosis and the spatial location of any previous cancer occurrence | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | Project | string | The study for which the data was generated. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | psa\_value | float | The lab value that represents the results of the most recent (post-operative) prostatic-specific antigen (PSA) in the blood. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | race | string | The text for reporting information about race based on the Office of Management and Budget (OMB) categories. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | residual\_tumor | string | Text terms to describe the status of a tissue margin following surgical resection. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | SampleBarcode | string | The barcode assigned by TCGA to a sample from a Participant | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | tobacco\_smoking\_history | string | Category describing current smoking status and smoking history as self-reported by a patient. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | total\_number\_of\_pregnancies | integer | | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | tumor\_tissue\_site | string | Text term that describes the anatomic site of the tumor or disease. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | tumor\_pathology | string | | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | tumor\_type | string | Text term to identify the morphologic subtype of papillary renal cell carcinoma. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | weiss\_venous\_invasion | string | The result of an assessment using the Weiss histopathologic criteria. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | vital\_status | string | the survival state of the person registered on the protocol. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | weight | integer | the weight of the patient measured in kilograms. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | year\_of\_initial\_pathologic\_diagnosis | string | Numeric value to represent the year of an individual’s initial pathologic diagnosis of cancer. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | SampleTypeCode | string | the type of the sample tumor or normal tissue cell or blood sample provided by a participant. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | has\_Illumina\_DNASeq | string | Indicates if a sample has gene sequencing data. “True”, “False”, or “None”. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | has\_BCGSC\_HiSeq\_RNASeq | string | Indicates if a sample has RNA sequencing data from the IlluminaHiSeq platform and the BCGSC pipeline. “True”, “False”, or “None”. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | has\_UNC\_HiSeq\_RNASeq | string | Indicates if a sample has RNA sequencing data from the IlluminaHiSeq platform and the UNC pipeline. “True”, “False”, or “None”. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | has\_BCGSC\_GA\_RNASeq | string | Indicates if a sample has RNA sequencing data from the IlluminaGA platform and the BCGSC pipeline. “True”, “False”, or “None”. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | has\_UNC\_GA\_RNASeq | string | Indicates if a sample has RNA sequencing data from the IlluminaGA platform and the UNC pipeline. “True”, “False”, or “None”. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | has\_HiSeq\_miRnaSeq | string | Indicates if a sample has microRNA data from the IlluminaHiSeq platform. “True”, “False”, or “None”. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | has\_GA\_miRNASeq | string | Indicates if a sample has microRNA data from the IlluminaGA platform. “True”, “False”, or “None”. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | has\_RPPA | string | Indicates if a sample has protein array data. “True”, “False”, or “None”. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | has\_SNP6 | string | Indicates if a sample has copy number data. “True”, “False”, or “None”. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | has\_27k | string | Indicates if a sample has methylation data from the Illumina 27k platform. “True”, “False”, or “None”. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ | has\_450k | string | Indicates if a sample has methylation data from the Illumina 450k platform. “True”, “False”, or “None”. | +----------------------------------------------------------------------+-------------+--------------------------------------------------------------------------------------------------------------------------------------------------------------+ Response If successful, this method returns a response body with the following structure: .. code-block:: javascript { "kind": "cohort_api#cohortsItem", "patient_count": string, "patients": [string], "sample_count": string, "samples": [string], } +---------------------+---------------------------+-------------------------------------------------------------------------------------------------------------+ | **Property name** | **Value** | **Description** | +=====================+===========================+=============================================================================================================+ | kind | cohort\_api#cohortsItem | The resource type. | +---------------------+---------------------------+-------------------------------------------------------------------------------------------------------------+ | patient_count | string | Number of participants in this cohort. | +---------------------+---------------------------+-------------------------------------------------------------------------------------------------------------+ | patients[] | list | List of participant barcodes in this cohort. | +---------------------+---------------------------+-------------------------------------------------------------------------------------------------------------+ | sample_count | string | Number of samples in this cohort. | +---------------------+---------------------------+-------------------------------------------------------------------------------------------------------------+ | samples[] | list | List of sample barcodes in this cohort. | +---------------------+---------------------------+-------------------------------------------------------------------------------------------------------------+