Integrative Genomics Viewer¶
Important: Improved integration of the IGV browser and the ISB-CGC BigQuery data tables is coming soon! Specifically the IGV browser will be able to access the high-level molecular data in the ISB-CGC BigQuery tables as well the low-level sequence data via the GA4GH API.
Accessing the IGV Browser¶
To access IGV, go to the cohort file list page. The file listing table includes a column labelled “IGV”. For those files that also have a ReadGroupSet ID in Google Genomics, a green check mark will appear in the column. Clicking on that link will take you to the IGV browser with the appropriate dataset and readgroupset preselected.